Publikationen:
Maschinelles Lernen in der Biologie

Zeitschriftenartikel (9)

1.
Zeitschriftenartikel
Karaletsos, T.; Stegle, O.; Dreyer, C.; Winn, J.; Borgwardt, K.: ShapePheno: Unsupervised extraction of shape phenotypes from biological image collections. Bioinformatics 28 (7), S. 1001 - 1008 (2012)
2.
Zeitschriftenartikel
Gretton, A.; Borgwardt, K.; Rasch, M.; Schölkopf, B.; Smola, A.: A Kernel Two-Sample Test. Journal of Machine Learning Research 13, S. 723 - 773 (2012)
3.
Zeitschriftenartikel
Song, L.; Smola, A.; Gretton, A.; Bedo, J.; Borgwardt, K.: Feature Selection via Dependence Maximization. Journal of Machine Learning Research 13, S. 1393 - 1434 (2012)
4.
Zeitschriftenartikel
Fusi, N.; Stegle, O.; Lawrence, N.: Joint Modelling of Confounding Factors and Prominent Genetic Regulators Provides Increased Accuracy in Genetical Genomics Studies. PLoS Computational Biology 8 (1), S. 1 - 9 (2012)
5.
Zeitschriftenartikel
Becker, C.; Hagmann, J.; Müller, J.; Koenig, D.; Stegle, O.; Borgwardt, K.; Weigel, D.: Spontaneous epigenetic variation in the Arabidopsis thaliana methylome. Nature 480 (7376), S. 245 - 249 (2011)
6.
Zeitschriftenartikel
Cao, J.; Schneeberger, K.; Ossowski , S.; Günther, T.; Bender , S.; Fitz, J.; Koenig, D.; Lanz, C.; Stegle, O.; Lippert, C. et al.; Wang, X.; Ott, F.; Müller, J.; Alonso-Blanco, C.; Borgwardt, K.; Schmid, K.; Weigel, D.: Whole-genome sequencing of multiple Arabidopsis thaliana populations. Nature Genetics 43 (10), S. 956 - 963 (2011)
7.
Zeitschriftenartikel
Lippert, C.; Listgarten, J.; Liu, Y.; Kadie , C.; Davidson, R.; Heckerman, D.: FaST linear mixed models for genome-wide association studies. Nature Methods 8 (10), S. 833 - 835 (2011)
8.
Zeitschriftenartikel
Shervashidze, N.; Schweitzer, P.; van Leeuwen , E.; Mehlhorn, K.; Borgwardt, M.: Weisfeiler-Lehman Graph Kernels. The Journal of Machine Learning Research 12, S. 2539 - 2561 (2011)
9.
Zeitschriftenartikel
Parts, L.; Stegle, O.; Winn, J.; Durbin, R.: Joint Genetic Analysis of Gene Expression Data with Inferred Cellular Phenotypes. PLoS Genetics 7 (1), S. 1 - 10 (2011)

Konferenzbeitrag (4)

10.
Konferenzbeitrag
Stegle, O.; Roth, F.; Morris, Q.; Listgarten, J.: Personalized medicine: from genotypes and molecular phenotypes towards computed therapy. In: Biocomputing 2012: Proceedings of the Pacific Symposium, S. 323 - 326 (Hg. Altman, R.; Dunker, A.; Hunter, L.; Murray, T.; Klein, T.). Pacific Symposium on Biocomputing (PSB 2012), Kohala Coast, HI, USA, 03. Januar 2012 - 07. Januar 2012. World Scientific Publishing, Singapore (2012)
11.
Konferenzbeitrag
Achlioptas, P.; Schölkopf, B.; Borgwardt, K.: Two-locus association mapping in subquadratic time. In: 17th ACM SIGKKD Conference on Knowledge Discovery and Data Mining (KDD 2011), S. 726 - 734 (Hg. Apté, C.; Ghosh, J.; Smyth, P.). 17th ACM SIGKKD Conference on Knowledge Discovery and Data Mining (KDD 2011), San Diego, CA, USA. ACM Press, New York, NY, USA (2011)
12.
Konferenzbeitrag
Kam-Thong, T.; Pütz, B.; Karbalai, N.; Müller−Myhsok, B.; Borgwardt, K.: Epistasis detection on quantitative phenotypes by exhaustive enumeration using GPUs. 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology (ISMB/ECCB 2011), Wien, Austria, 17. Juli 2011 - 19. Juli 2011. Bioinformatics 27 (13), S. i214 - i221 (2011)
13.
Konferenzbeitrag
Li, L.; Rakitsch, B.; Borgwardt, K.: ccSVM: correcting Support Vector Machines for confounding factors in biological data classification. 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology (ISMB/ECCB 2011), Wien, Austria, 17. Juli 2011 - 19. Juli 2011. Bioinformatics 27 (13), S. i342 - i348 (2011)

Vortrag (2)

14.
Vortrag
Stegle, O.: Exploiting NGS technologies for efficient and accurate genotype to phenotype mapping in plant systems. XVth Meeting of the EUCARPIA Section: Biometrics in Plant Breeding, Stuttgart-Hohenheim, Germany (2012)
15.
Vortrag
Borgwardt, K.: Two-locus association mapping in subquadratic time. Seminar Series: European Molecular Biology Laboratory, Heidelberg, Germany (2011)
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