_{Publications:
Computational Neuroanatomy}

Benezra, S.; Narayanan, R.; Egger, R.; Oberlaender, M.; Long, M.: Morphological characterization of HVC projection neurons in the zebra finch (Taeniopygia guttata). Journal of Comparative Neurology 526 (10), pp. 1673 - 1689 (2018)

Guest, J.; Seetharama, M.; Wendel, E.; Strick, P.; Oberlaender, M.: 3D reconstruction and standardization of the rat facial nucleus for precise mapping of vibrissal motor networks. Neuroscience 368, pp. 171 - 186 (2018)

Rojas-Piloni, G.; Guest, J.; Egger, R.; Johnson, A.; Sakmann, B.; Oberlaender, M.: Relationships between structure, in vivo function and long-range axonal target of cortical pyramidal tract neurons. Nature Communications 8, 870, pp. 1 - 11 (2017)

Kornfeld, J.; Benezra, S.; Narayanan, R.; Svara, F.; Egger, R.; Oberlaender, M.; Denk, W.; Long, M.: EM connectomics reveals axonal target variation in a sequence-generating network. eLife 6 (3), pp. 1 - 20 (2017)

Landau, I.; Egger, R.; Dercksen, V.; Oberlaender, M.; Sompolinsky, H.: The Impact of Structural Heterogeneity on Excitation-Inhibition Balance in Cortical Networks. Neuron 92 (5), pp. 1106 - 1121 (2016)

Barth, A.; Burkhalter, A.; Callaway, E.; Connors, B.; Cauli, B.; DeFelipe, J.; Feldmeyer, D.; Freund, T.; Kawaguchi, Y.; Kisvarday, Z. et al.; Kubota, Y.; McBain, C.; Oberlaender, M.; Rossier, J.; Rudy, B.; Staiger, J.; Somogyi, P.; Tamas, G.; Yuste, R.: Comment on “Principles of connectivity among morphologically defined cell types in adult neocortex”. Science 353 (6304), p. 1108 - 1108 (2016)

Egger, R.; Schmitt, A.; Wallace, D.; Sakmann, B.; Oberlaender, M.; Kerr, J.: Robustness of sensory-evoked excitation is increased by inhibitory inputs to distal apical tuft dendrites. Proceedings of the National Academy of Sciences of the United States of America 112 (45), pp. 14072 - 14077 (2015)

Narayanan, R.; Egger, R.; Johnson, A.; Mansvelder, H.; Sakmann, B.; de Kock, C.; Oberlaender, M.: Beyond Columnar Organization: Cell Type- and Target Layer-Specific Principles of Horizontal Axon Projection Patterns in Rat Vibrissal Cortex. Cerebral Cortex 25 (11), pp. 4450 - 4468 (2015)

Haberl, M.; Viana da Silva, S.; Guest, J.; Ginger, M.; Ghanem, A.; Mulle, C.; Oberlaender, M.; Conzelmann, K.-K.; Frick, A.: An anterograde rabies virus vector for high-resolution large-scale reconstruction of 3D neuron morphology. Brain Structure and Function 220 (3), pp. 1369 - 1379 (2015)

Egger, R.; Dercksen , V. J.; Udvary, D.; Hege, H.-C.; Oberlaender, M.: Generation of dense statistical connectomes from sparse morphological data. Frontiers in Neuroanatomy 8, 129, pp. 1 - 18 (2014)

Dercksen, V. J.; Hege, H.-C.; Oberlaender, M.: The filament editor: an interactive software environment for visualization, proof-editing and analysis of 3D neuron morphology. Neuroinformatics 12 (2), pp. 325 - 339 (2014)

Meyer, H.; Egger, R.; Guest, J.; Foerster, R.; Reissl, S.; Oberlaender, M.: Cellular organization of cortical barrel columns is whisker-specific. Proceedings of the National Academy of Sciences of the United States of America 110 (47), pp. 19113 - 19118 (2013)

Narayanan, R.; Egger, R.; de Kock, C.; Oberlaender, M.: Neuronal Cell Types in the Neocortex. In: Axons and Brain Architecture, 19, pp. 183 - 202 (Ed. Rockland, K.S.). Elsevier Academic Press, Amsterdam, The Netherlands (2016)

Egger, R.; Oberlaender, M.: Cell Types in the Cerebral Cortex: An Overview from the Rat Vibrissal Cortex. In: Brain Mapping: An Encyclopedic Reference, Vol. 2, pp. 59 - 64 (Ed. Toga, A.). Academic Press, Amsterdam, The Netherlands (2015)

Egger, R.; Dercksen, V.; De Kock, C.; Oberlaender, M.: Reverse engineering the 3D structure and sensory-evoked signal flow of rat vibrissal cortex. In: The Computing Dendrite: form Structure to Function, pp. 127 - 145 (Eds. Cuntz, H.; Remme, M.). Springer, New York, NY, USA (2014)

Dercksen, V.; Hege, H.-C.; Oberlaender, M.: The Filament Editor: An Interactive Software Environment for Visualization, Proof-Editing, and Analysis of 3D Neuron Morphology. In: Short Course II (Neuroscience 2014): Advances in Brain-Scale, Automated Anatomical Techniques: Neuronal Reconstruction, Tract Tracing, and Atlasing, pp. 64 - 72 (Ed. Seung, S.). Short Course II (Neuroscience 2014): Advances in Brain-Scale, Automated Anatomical Techniques: Neuronal Reconstruction, Tract Tracing, and Atlasing, Washington, DC, USA. Society for Neuroscience, Washington, DC, USA (2014)

Udvary, D.; Egger, R.; Dercksen, V.; Oberlaender, M.: Dense Statistical Connectome of Rat Barrel Cortex. In 17th Conference of Junior Neuroscientists of Tübingen (NeNa 2016): Neuroscience & Law, p. 11 - 11. 17th Conference of Junior Neuroscientists of Tübingen (NeNa 2016): Neuroscience & Law, Schramberg, Germany. (2016)

Landau, I.; Egger, R.; Dercksen, V.; Oberlaender, M.; Sompolinsky, H.: Slow adaptation facilitates excitation-inhibition balance in the presence of structural heterogeneity. In Computational and Systems Neuroscience Meeting (COSYNE 2016), T-18, pp. 34 - 35. Computational and Systems Neuroscience Meeting (COSYNE 2016), Salt Lake City, UT, USA, February 25, 2016 - February 28, 2016. (2016)

Rojas-Pilon, G.; Guest, J.; Egger, R.; Johnson, A.; Oberlaender, M.: Deconstruction of sensory stimuli in L5 of rat barrel cortex via parallel long-range pathways to disjoint subcortical targets. In Somatosensory & Motor Research, 33 1 Ed., p. 66 - 66. 28th Annual Barrels Meeting (Barrels XVIII), Chicago, IL, USA. (2015)

Egger, R.; Dercksen, V.; Udvary, D.; Hege, H.-C.; Oberlaender, M.: The barrel cortex connectome: dense statistical connectivity from sparse reconstructions of neural circuits. In Somatosensory & Motor Research, 32 (3), p. 181 - 181. 27th Annual Barrels Meeting (Barrels XXVII), Baltimore, MD, USA. (2014)

Haberl, M.; da Silva, S.; Guest, J.; Ginger, M.; Ghanem, A.; Mulle, C.; Oberlaender, M.; Conzelmann, K.-K.; Frick, A.: An anterograde rabies virus vector for high‐resolution large‐scale reconstruction of 3D neuron morphology. In 3rd International Symposium Frontiers in Neurophotonics (FINS 2013), p. 60. 3rd International Symposium Frontiers in Neurophotonics (FINS 2013), Bordeaux, France, October 01, 2013 - October 04, 2013. (2013)

Oberlaender, M.: Towards a brain-wide model of sensory perception in the rodent whisker system. Interdisciplinary Center for Neurosciences, IZN Retreat: Connectomics, Kloster Schöntal, Germany (2016)

Oberlaender, M.: Towards a brain-wide model of perceptual decision-making in the rodent whisker system. 7th Biennial Neuroscience Conference Neurizons 2016: Speak your mind, Göttingen, Germany (2016)

Oberlaender, M.: Cortical Drive by Deep Layer Networks. Barrel Cortex Function 2016, Amsterdam, The Netherlands (2016)

Oberlaender, M.: Towards a brain-wide model of sensory perception in the rodent whisker system. NeuroForum Freiburg 2016: Assembly and Functions of Synapses and Neuronal Networks for Behaviour, Freiburg i.Br., Germany (2016)

Oberlaender, M.: Towards a brain-wide model of perceptual decision-making in the rodent whisker system. Universidad Nacional Autónoma de México: Instituto de Neurobiología, Juriquilla, Mexico (2015)

Oberlaender, M.: Reverse engineering sensory perception and decision making: bridging physiology, anatomy and behavior. Public Lectures Assistant Professorship with Tenure Track in Neurobiology, Zürich, Switzerland (2015)

Oberlaender, M.: Neuronal Network Models of Cortex with well-constrained Connectivity: The Barrel Cortex Connectome. Hebrew University: The Max Planck Center for Brain Research, Jerusalem, Israel (2014)

Oberlaender, M.: 3D Reconstruction of Neuronal Networks: At Large-Scales and Subcellular Resolution. SFN Short Course "Advances in Brain-scale, Automated Anatomical Techniques: Neuronal Reconstruction, Tract Tracing, and Atlasing", Washington, DC, USA (2014)

Oberlaender, M.: From Macro- to Micro-Scale: dense statistical connectivity of rodent barrel cortex. Max Planck / HHMI Connectomics Conference, Berlin, Germany (2014)

Oberlaender, M.: Structural Organization of the Rodent Whisker System. Bernstein Conference 2014: Satellite Workshop "From structure and function towards computational principles in the rodent whisker system", Göttingen, Germany (2014)

Oberlaender, M.: Structural Organization of the Nervous System. Radboud University: Donders Summer School, Nijmegen, The Netherlands (2014)

Oberlaender, M.: Reverse engineering sensory perception and decision making: bridging physiology, anatomy and behavior. NeuroBridges Workshop, Göttingen, Germany (2014)

Oberlaender, M.: Reverse engineering sensory perception and decision making: bridging physiology, anatomy and behavior. Erasmus University 2014 Seminar Series, Rotterdam, The Netherlands (2014)

Oberlaender, M.: Reverse engineering sensory perception and decision making: bridging physiology, anatomy and behavior. 6th International Conference on Brain and Cognitive Engineering (BCE 2014), Tübingen, Germany (2014)

Oberlaender, M.: The Barrel Cortex Connectome and its Functional Implications for Whisker-Evoked Excitation. Barrels Conference 2014: Developmental, cellular and circuit mechanisms of cortical sensory information processing, Göttingen, Germany (2014)

Oberlaender, M.: The Barrel Cortex Connectome and its Functional Implications for Whisker-Evoked Excitation. GGNB Course: Cellular and Circuit Mechanisms of Somatosensory Information Processing, Göttingen, Germany (2014)

Slabik, D.: Putative synaptische Verbindungen zwischen kortikalen Nervenzellen in vivo. Doktorandenclub: Forum Scirentiarium, Tübingen, Germany (2014)

Oberlaender, M.: Komplexer als das Universum? Neueste Einblicke in die Struktur des Gehirns. Vorträge des TÜFFF (Tübinger Fenster für Forschung), Tübingen, Germany (2014)

Oberlaender, M.: Structural organization principles of the vibrissal sensory-motor system in rats. Center of Advanced European Studies and Research (caesar), Bonn, Germany (2014)

Oberlaender, M.: Reverse engineering the 3D structure and function of rat neocortex. Methodseminar Tübingen Hearing Research Centre (THRC), Tübingen, Germany (2014)

Oberlaender, M.: Reverse-Engineering the 3D Structure and Sensory-Evoked Signal Flow of the Rodent Whisker System. Monday Seminar: Brain Research Institute, University of Zurich, Zürich, Switzerland (2013)

Oberlaender, M.: Digital Neuroanatomy of the Rodent Whisker System. Scientific Retreat: Max Planck Florida Institute for Neuroscience, Islamorada, FL, USA (2013)

Oberlaender, M.: Reverse engineering the 3D structure and sensory-evoked signal flow of the rat whisker system. 3rd International caesar Conference "Chasing the Neuronal Ensemble II": Center of Advanced European Studies and Research, Bonn, Germany (2013)

Oberlaender, M.: Reverse-engineering the 3D structure and sensory-evoked signal flow of rat neocortex. International School for Advanced Studies (SISSA), Trieste, Italy (2013)

Oberlaender, M.: In the Pursuit of Connectomes: Combining in vivo Recordings with automated Reconstructions of complete 3D Neuron Morphology. Conference: Digital Reconstruction of Neuronal Morphology: Recognizing the Breakthroughs, George Mason University, Washington, DC, USA (2013)

Oberlaender, M.: Simulation of sensory-evoked signal flow in anatomically realistic 3D reconstructions of rat cortex. Workshop Predictive Neuroinformatics, Radboud University, Nijmegen, The Netherlands (2013)

Oberlaender, M.: Beyond barrel columns: Structural organization principles of neural circuits in rat vibrissal cortex. HHMI Janelia Farm Conference: The Neural Basis of Vibrissa-Based Tactile Sensation, Ashburn, VA, USA (2013)

Oberlaender, M.: Large-scale high-resolution microscopy in the pursuit of connectomes. Symposium of the Tübingen BioImaging Group 2013, Tübingen, Germany (2013)

Oberlaender, M.: Simulation of sensory-evoked signal flow in 3D reconstructions of anatomically realistic network models. 3D Virtual Cell Conference 2012, San Diego, CA, USA (2012)