Publications:
Department for Physiology of Cognitive Processes

Journal Article (23)

1.
Journal Article
Fardet, T.; Levina, A.: Simple models including energy and spike constraints reproduce complex activity patterns and metabolic disruptions. PLoS Computational Biology 16 (12), pp. 1 - 22 (2020)
2.
Journal Article
Ramirez-Villegas, J.; Besserve, M.; Murayama, Y.; Evrard, H.; Oeltermann, A.; Logothetis, N.: Author Correction: Coupling of hippocampal theta and ripples with pontogeniculooccipital waves. Nature 588 (7839), p. E34 (2020)
3.
Journal Article
Tremblay, S.; Acker, L.; Afraz, A.; Albaugh , D.; Amita, H.; Andrei, A.; Angelucci, A.; Aschner, A.; Balan, P.; Basso, M. et al.; Benvenuti , G.; Bohlen, M.; Caiola, M.; Calcedo, R.; Cavanaugh , J.; Chen, Y.; Chernov, M.; Clark, A.; Dai, J.; Debes, S.; Deisseroth, K.; Desimone, R.; Dragoi , V.; Egger, S.; Eldridge, M.; El-Nahal, H.; Fabbrini , F.; Federer, F.; Fetsch, C.; Fortuna, M.; Friedman , R.; Fujii, N.; Gail, A.; Galvan, A.; Ghosh, S.; Gieselmann, M.; Gulli, R.; Hikosaka , O.; Hosseini , E.; Hu, X.; Hüer, J.; Inoue , K.-I.; Janz, R.; Jazayeri, M.; Jiang, R.; Ju, N.; Kar, K.; Klein, C.; Kohn, A.; Komatsu , M.; Maeda, K.; Martinez-Trujillo , J.; Matsumoto, M.; Maunsell, J.; Mendoza-Halliday , D.; Monosov , I.; Muers, R.; Nurminen, L.; Ortiz-Rios , M.; O'Shea , D.; Palfi, S.; Petkov, C.; Pojoga , S.; Rajalingham , R.; Ramakrishnan, C.; Remington, E.; Revsine , D.; Roe, A.; Sabes , P.; Saunders, R.; Scherberger, H.; Schmid, M.; Schultz, W.; Seidemann , E.; Senova, Y.-S.; Shadlen, M.; Sheinberg, D.; Siu, C.; Smith, Y.; Solomon, S.; Sommer, M.; Spudich , J.; Stauffer, W.; Takada , M.; Tang, S.; Thiele, A.; Treue, S.; Vanduffel , W.; Vogels, R.; Whitmire , M.; Wichmann, T.; Wurtz , R.; Xu, H.; Yazdan-Shahmorad , A.; Shenoy, K.; DiCarlo , J.; Platt, M.: An Open Resource for Non-human Primate Optogenetics. Neuron 108 (6), pp. 1075 - 1090 (2020)
4.
Journal Article
Yuste, R.; Hawrylycz, M.; Aalling, N.; Arendt, D.; Armananzas, R.; Ascoli, G.; Bielza, C.; Bokharaie, V.; Bergmann, T.; Bystron, I. et al.; Capogna, M.; Chang, Y.; Clemens , A.; de Kock, C.; DeFelipe, J.; Dos Santos, S.; Dunville, K.; Feldmeyer, D.; Fiáth, R.; Fishell, G.; Foggetti, A.; Gao, X.; Ghaderi, P.; Güntürkün, O.; Hall, V.; Helmstaedter, M.; Herculano-Houzel, S.; Hilscher, M.; Hirase, H.; Hjerling-Leffler, J.; Hodge, R.; Huang, Z.; Huda, R.; Juan, Y.; Khodosevich, K.; Kiehn, O.; Koch, H.; Kuebler, E.; Kühnemund, M.; Larrañaga, P.; Lelieveldt, D.; Louth, E.; Lui, J.; Mansvelder, H.; Marin, O.; Martínez-Trujillo, J.; Moradi, H.; Goriounova, N.; Mohapatra, A.; Nedergaard, M.; Němec, P.; Ofer, N.; Pfisterer, U.; Pontes, S.; Redmond , W.; Rossier, J.; Sanes, J.; Scheuermann, R.; Serrano Saiz, E.; Somogyi, P.; Tamás, G.; Tolias, A.; Tosches, M.; Turrero Garcia, M.; Aguilar-Valles, A.; Munguba, H.; Wozny, C.; Wuttke, T.; Yong, L.; Zeng, H.; Lein, E.: A community-based transcriptomics classification and nomenclature of neocortical cell types. Nature Neuroscience 23 (12), pp. 1456 - 1468 (2020)
5.
Journal Article
Poe, G.; Foote, S.; Eschenko, O.; Johansen, J.; Bouret, S.; Aston-Jones, G.; Harley, C.; Manahan-Vaughan, D.; Weinshenker, D.; Valentino, R. et al.; Berridge, C.; Chandler, D.; Waterhouse, S.; Sara, S.: Locus coeruleus: a new look at the blue spot. Nature Reviews Neuroscience 21 (11), pp. 644 - 659 (2020)
6.
Journal Article
Fardet, T.; Hütten, M.; Lohmann, S.; Medavar, E.; Milucka, J.; Roesch, J.; Rolfes, J.; Schweizer, J.: Making science organizations sustainable: The mission of the Max Planck sustainability network. Frontiers in Sustainability 1, 567211, pp. 1 - 7 (2020)
7.
Journal Article
Baden, T.; Maina , M.; Chagas, A.; Mohammed, Y.; Auer, T.; Silbering, A.; von Tobel, L.; Pertin, M.; Hartig, R.; Aleksic, J. et al.; Akinrinade , I.; Awadelkareem, M.; Koumoundourou, A.; Jones, A.; Beale, A.; Münch, D.; Salek , S.; Yusuf, S.; Prieto-Godino, L.: TReND in Africa: Toward a Truly Global (Neuro)science Community. Neuron 107 (3), pp. 412 - 416 (2020)
8.
Journal Article
Grodd, W.; Kumar, V.; Schüz, A.; Lindig, T.; Scheffler, K.: The Anterior and Medial Thalamic Nuclei and the Human Limbic System: Tracing the Structural Connectivity Using Diffusion-Weighted Imaging. Scientific Reports 10 (1), 10957, pp. 1 - 25 (2020)
9.
Journal Article
Schauer, G.; Ogawa, C.; Tsuchiya, N.; Bartels, A.: Conscious Perception of Flickering Stimuli in Binocular Rivalry and Continuous Flash Suppression Is Not Affected by tACS-induced SSR Modulation. Consciousness and Cognition 82, 102953, pp. 1 - 15 (2020)
10.
Journal Article
Logothetis, N.: Q&A Nikos K. Logothetis. Neuron 106 (6), pp. 884 - 889 (2020)
11.
Journal Article
Mitricheva, E.; Kimura, R.; Logothetis, N.; Noori, H.: Reply to Poeppl et al.: Controlling for false positive rates is critical for accurate and consistent interpretation of findings. Proceedings of the National Academy of Sciences of the United States of America 117 (21), p. 11206 (2020)
12.
Journal Article
Panagiotaropoulos, T.; Dwarakanath, A.; Kapoor, V.: Prefrontal Cortex and Consciousness: Beware of the Signals. Trends in Cognitive Sciences 24 (5), pp. 343 - 344 (2020)
13.
Journal Article
Fathizadeh, F.; Kafkoulis , Y.; Marcolli , M.: Bell Polynomials and Brownian Bridge in Spectral Gravity Models on Multifractal Robertson–Walker Cosmologies. Annales Henri Poincaré 21 (4), pp. 1329 - 1382 (2020)
14.
Journal Article
Jannesari, M.; Saeedi, A.; Zare, M.; Ortiz-Mantilla , S.; Plenz, D.; Benasich, A.: Stability of neuronal avalanches and long-range temporal correlations during the first year of life in human infants. Brain Structure & Function 225 (3), pp. 1169 - 1183 (2020)
15.
Journal Article
Jannesari, M.; Saeedi, A.; Zare, M.; Ortiz-Mantilla , S.; Plenz, D.; Benasich, A.: Retraction Note to: Stability of neuronal avalanches and long-range temporal correlations during the first year of life in human infant. Brain Structure & Function 225 (3), p. 1167 (2020)
16.
Journal Article
Kringelbach, M.; Cruzat, J.; Cabral, J.; Knudsen, G.; Carhart-Harris, R.; Whybrow, P.; Logothetis, N.; Deco, G.: Dynamic coupling of whole-brain neuronal and neurotransmitter systems. Proceedings of the National Academy of Sciences of the United States of America 117 (17), pp. 9566 - 9576 (2020)
17.
Journal Article
Papageorgiou, C.; Kouroupetroglou , G.; Stachtea, X.; Papageorgiou, P.; Mavromatos, A.; Chrousos, G.; Logothetis, N.; Tsaltas, E.: Perspective-Taking in Blindness: An Event- Related Brain Potentials Study With the Continuous Wavelet Transform. IEEE Access 8, pp. 76657 - 76670 (2020)
18.
Journal Article
Garello, F.; Gündüz, S.; Vibhute, S.; Angelovski, G.; Terreno, E.: Dendrimeric calcium-sensitive MRI probes: the first low-field relaxometric study. Journal of Materials Chemistry B 8 (5), pp. 969 - 979 (2020)
19.
Journal Article
Milham, M.; Petkov, C.; Margulies, D.; Schroeder, C.; Basso, M.; Belin, P.; Fair, D.; Fox, A.; Kastner, S.; Mars, R. et al.; Messinger, A.; Poirier, C.; Vanduffel , W.; Van Essen, D.; Alvand, A.; Becker, Y.; Ben Hamed, S.; Benn, A.; Bodin, C.; Boretius, S.; Cagna, B.; Coulon, O.; El-Gohary, S.; Evrard, H.; Forkel, S.; Friedrich, P.; Froudist-Walsh, S.; Garza-Villarreal, E.; Gao, Y.; Gozzi, A.; Grigis, A.; Hartig, R.; Hayashi, T.; Heuer, K.; Howells, H.; Ardesch, D.; Jarraya, B.; Jarrett, W.; Jedema, H.; Kagan, I.; Kelly, C.; Kennedy, H.; Klink, P.; Kwok, S.; Leech, R.; Liu, X.; Madan, C.; Madushanka, W.; Majka, P.; Mallon, A.; Marche, K.; Meguerditchian, A.; Menon, R.; Merchant, H.; Mitchell, A.; Nenning, K.; Nikolaidis, A.; Ortiz-Rios, M.; Pagani, M.; Pareek, V.; Prescott, M.; Procyk, E.; Rajimehr, R.; Rautu, I.; Raz, A.; Roe, A.; Rossi-Pool, R.; Roumazeilles, L.; Sakai, T.; Sallet, J.; García-Saldivar, P.; Sato, C.; Sawiak, S.; Schiffer, M.; Schwiedrzik, C.; Seidlitz, J.; Sein, J.; Shen, Z.; Shmuel, A.; Silva, A.; Simone, L.; Sirmpilatze, N.; Sliwa, J.; Smallwood, J.; Tasserie, J.; Thiebaut de Schotten, M.; Toro, R.; Trapeau, R.; Uhrig, L.; Vezoli, J.; Wang, Z.; Wells, S.; Williams, B.; Xu, T.; Xu, A.; Yacoub, E.; Zhan, M.; Ai, L.; Amiez, C.; Balezeau, F.; Baxter, M.; Blezer, E.; Brochier, T.; Chen, A.; Croxson, P.; Damatac, C.; Dehaene, S.; Everling, S.; Fleysher, L.; Freiwald, W.; Griffiths, T.; Guedj, C.; Hadj-Bouziane, F.; Harel, N.; Hiba, B.; Jung, B.; Koo, B.; Laland, K.; Leopold, D.; Lindenfors, P.; Meunier, M.; Mok, K.; Morrison, J.; Nacef, J.; Nagy, J.; Pinsk, M.; Reader, S.; Roelfsema, P.; Rudko, D.; Rushworth, M.; Russ, B.; Schmid, M.; Sullivan, E.; Thiele, A.; Todorov, O.; Tsao, D.; Ungerleider, L.; Wilson, C.; Ye, F.; Zarco, W.; Zhou, Y.: Accelerating the Evolution of Nonhuman Primate Neuroimaging. Neuron 105 (4), pp. 600 - 603 (2020)
20.
Journal Article
Tuzzi, E.; Balla, D.; Loureiro, J.; Neumann, M.; Laske, C.; Pohmann, R.; Preische, O.; Scheffler, K.; Hagberg, G.: Ultra-High Field MRI in Alzheimer's Disease: Effective Transverse Relaxation Rate and Quantitative Susceptibility Mapping of Human Brain In Vivo and Ex Vivo Compared to Histology. Journal of Alzheimer's Disease 73 (4), pp. 1481 - 1499 (2020)
21.
Journal Article
Zierenberg, J.; Wilting, J.; Priesemann, V.; Levina, A.: Tailored ensembles of neural networks optimize sensitivity to stimulus statistics. Physical Review Research 2, 013115, pp. 1 - 9 (2020)
22.
Journal Article
Zierenberg, J.; Wilting, J.; Priesemann, V.; Levina, A.: Description of spreading dynamics by microscopic network models and macroscopic branching processes can differ due to coalescence. Physical Review E 101 (2), 022301, pp. 1 - 13 (2020)
23.
Journal Article
Handwerker, J.; Pérez-Rodas, M.; Beyerlein, M.; Vincent, F.; Beck, A.; Freytag, N.; Yu, X.; Pohmann, R.; Anders, J.; Scheffler, K.: A CMOS NMR needle for probing brain physiology with high spatial and temporal resolution. Nature methods 17 (1), pp. 64 - 67 (2020)

Conference Paper (2)

24.
Conference Paper
Besserve, M.; Mehrjou, A.; Sun, R.; Schölkopf, B.: Counterfactuals uncover the modular structure of deep generative models. In: Eighth International Conference on Learning Representations (ICLR 2020). Eighth International Conference on Learning Representations (ICLR 2020), Addis Ababa, Ethiopia, April 26, 2020 - April 30, 2020. (2020)
25.
Conference Paper
Schilling, T.; Soltanlou, M.; Seshadri, Y.; Nuerk, H.-C.; Bahmani, H.: Blue Light and Melanopsin Contribution to the Pupil Constriction in the Blind-spot, Parafovea and Periphery. In: BIOSTEC 2020: Proceedings of the 13th International Joint Conference on Biomedical Engineering Systems and Technologies, Vol. 5, pp. 482 - 489 (Eds. Cabitza, F.; Fred, A.; Gamboa, H.). 13th International Conference on Health Informatics (HEALTHINF 2020), Valletta, Malta, February 24, 2020 - February 26, 2020. Scitepress, Setúbal, Portugal (2020)

Meeting Abstract (3)

26.
Meeting Abstract
Iwai, R.; Vinogradov, O.; Logothetis, N.; Levina, A.; Totah, N.: ACC single unit and neuronal population correlates of response conflict versus and error detection in a novel rodent near mistake paradigm. In AREADNE 2020: Research in Encoding and Decoding of Neural Ensembles, p. 20 (Eds. Pezaris, J.; Hatsopoulos, N.). AREADNE 2020: Research in Encoding and Decoding of Neural Ensembles, Santorini, Greece, June 16, 2020 - June 20, 2020. The AREADNE Foundation, Cambridge, MA, USA (2020)
27.
Meeting Abstract
Noei, S.; Zouridis, I.; Logothetis, N.; Panzeri, S.; Totah, N.: Noradrenergic locus coeruleus ensembles fire at distinct times to evoke different cortical states in rat prefrontal cortex. In AREADNE 2020: Research in Encoding and Decoding of Neural Ensembles, p. 94 (Eds. Pezaris, J.; Hatsopoulos, N.). AREADNE 2020: Research in Encoding and Decoding of Neural Ensembles, Santorini, Greece, June 16, 2020 - June 20, 2020. The AREADNE Foundation, Cambridge, MA, USA (2020)
28.
Meeting Abstract
Sukenik, N.; Vinogradov, O.; Levina, A.; Segal, M.; Moses, E.: Impact of excitatory/inhibitory compositions on network dynamics and balance in neuronal cultures. In 28th Annual Meeting of the Israel Society for Neuroscience (ISFN 2020), pp. 175 - 176. 28th Annual Meeting of the Israel Society for Neuroscience (ISFN 2020), Eilat, Israel, January 05, 2020 - January 07, 2020. (2020)

Talk (5)

29.
Talk
Eschenko, O.: Locus coeruleus activity after learning: implication for off-line memory consolidation. ISGN Symposium: The catecholaminergic regulation of cognition and memory, Bochum, Germany (2020)
30.
Talk
Paolillo, M.; Hartig, R.: Life after the PhD: academia or industry? 21st Conference of Junior Neuroscientists (NeNa 2020) (2020)
31.
Talk
Logothetis, N.: Interaction of hippocampal ripples: Theta oscillations and Pontine-Geniculo-Occipital waves leading to brainwide metastates related to learning and memory consolidation. Neuroscience School of Advanced Studies: Neural Circuit Dynamics, Venezia, Italy (2020)
32.
Talk
Kapoor, V.: Decoding the Contents of Conscious Perception from Neural Activity in the Prefrontal Cortex During a No Report Binocular Rivalry Paradigm. Third Meeting of Consciousness Research Network (CoRN 2020), Shanghai, China (submitted)
33.
Talk
Logothetis, N.: Multidisciplinary Approaches for the Study of Self-Organization Principles in the Primate Brain. University of Copenhagen: Department of Neuroscience, Copenhagen, Denmark (2020)

Poster (7)

34.
Poster
Azizpour, S.; Zierenberg, J.; Priesemann, V.; Levina, A.: The observation time changes dynamic range in recurrent networks. Bernstein Conference 2020 (2020)
35.
Poster
Fardet, T.; Levina, A.: Investigating the influence of metabolic disruption on complex activity patterns with extended neuronal models. Bernstein Conference 2020 (2020)
36.
Poster
Zeraati, R.; Shi, Y.; Steinmetz, N.; Moore, T.; Engel, T.; Levina, A.: Timescales of neural activity reflect the local network connectivity and are modulated during spatial attention. Bernstein Conference 2020 (2020)
37.
Poster
Levina, A.; Safavi, S.; Logothetis, N.; Chalk, M.: Signatures of criticality observed in efficient coding networks. Computational and Systems Neuroscience Meeting (COSYNE 2020) , Denver, CO, USA (2020)
38.
Poster
Safavi, S.; Panagiotaropoulos, F.; Kapoor, V.; Ramirez-Villegas, J.; Logothetis, N.; Besserve, M.: Uncovering the organization of neural circuits with generalized phase-locking analysis. Computational and Systems Neuroscience Meeting (COSYNE 2020) , Denver, CO, USA (2020)
39.
Poster
Shi, Y.; Zeraati, R.; Levina, A.; Engel, T.: Spatiotemporal neural correlations and network dynamics. Computational and Systems Neuroscience Meeting (COSYNE 2020) , Denver, CO, USA (2020)
40.
Poster
Zeraati, R.; Shi, Y.; Gieselmann, M.; Steinmetz, N.; Moore, T.; Thiele, A.; Engel, T.; Levina, A.: Timescales of ongoing activity reflect local connectivity and are modulated during attention. Computational and Systems Neuroscience Meeting (COSYNE 2020) , Denver, CO, USA (2020)

Working Paper (16)

41.
Working Paper
Besserve, M.; Buchholz, S.; Schölkopf, B.: Assaying Large-scale Testing Models to InterpretCovid-19 Case Numbers: A Cross-country Study. (submitted)
42.
Working Paper
Krockenberger, M.; Saleh, T.; Logothetis, N.; Evrard, H.: Connection “Stripes” in the Primate Insula. (submitted)
43.
Working Paper
Chicharro, B.; Besserve, M.; Panzeri, S.: Causal learning with sufficient statistics: an information bottleneck approach. (submitted)
44.
Working Paper
Zeraati, R.; Priesemann, V.; Levina, A.: Self-organization toward criticality by synaptic plasticity. (submitted)
45.
Working Paper
Hartig, R.; Glen, D.; Jung, B.; Logothetis, N.; Paxinos, G.; Garza-Villarreal, E.; Messinger, A.; Evrard, H.: Subcortical Atlas of the Rhesus Macaque (SARM) for Magnetic Resonance Imaging. NeuroImage (submitted)
46.
Working Paper
Noei, S.; Zouridis, I.; Logothetis, N.; Panzeri, S.; Totah, N.: Distinct ensembles in the noradrenergic locus coeruleus evoke diverse cortical states. (submitted)
47.
Working Paper
Zeraati, R.; Engel, T.; Levina, A.: Estimation of autocorrelation timescales with Approximate Bayesian Computations. (submitted)
48.
Working Paper
Bokharaie, V.: A Review of known properties of von Economo Neurons (VENs). (submitted)
49.
Working Paper
Bokharaie, V.: A Stratified Model to Quantify the Effects of Containment Policies on the Spread of COVID-19. (submitted)
50.
Working Paper
Bokharaie, V.: Analysis of the Spread of COVID-19 and Effectiveness of Containment Strategies: Case study of Germany. (submitted)
51.
Working Paper
Bokharaie, V.: A Mathematical Model to Predict the Spread of COVID-19 in a Population and Evaluate the Effectiveness of Containment Strategies. (submitted)
52.
Working Paper
Bokharaie, V.: Iran and COVID-19: The Unfolding of a Humanitarian Disaster. (submitted)
53.
Working Paper
Noei, S.; Zouridis, I.; Logothetis, N.; Panzeri, S.; Totah, N.: Noradrenergic locus coeruleus ensembles evoke different states in rat prefrontal cortex. (submitted)
54.
Working Paper
Dwarakanath, A.; Kapoor, V.; Werner, J.; Safavi, S.; Fedorov, L.; Logothetis, N.; Panagiotaropoulos, F.: Prefrontal state fluctuations control access to consciousness. (submitted)
55.
Working Paper
Fardet, T.; Levina, A.: Energy-based models to describe complex neuronal activities and metabolic constraints. (submitted)
56.
Working Paper
Kapoor, V.; Dwarakanath, A.; Safavi, S.; Werner, J.; Besserve, M.; Panagiotaropoulos, F.; Logothetis, N.: Decoding the contents of consciousness from prefrontal ensembles. (submitted)
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