Publications of X Yu

Choi, S.; Zeng, H.; Chen, Y.; Sobczak, F.; Qian, C.; Yu, X.: Laminar-specific functional connectivity mapping with multi-slice line-scanning fMRI. Cerebral Cortex 32 (20), pp. 4492 - 4501 (2022)

Castaneda-Vega, S.; Beer-Hammer, S.; Leiss, V.; Napieczyńska, H.; Vuozzo, M.; Schmid, A.; Zeng, H.; He, Y.; Kohlhofer, U.; Gonzalez-Menendez, I. et al.; Quintanilla-Martinez, L.; Hempel, J.-M.; Gollasch, M.; Yu, X.; Pichler, B.; Nürnberg, B.: Cerebrovascular G i Proteins Protect Against Brain Hypoperfusion and Collateral Failure in Cerebral Ischemia. Molecular Imaging & Biology Epub ahead (2022)

Zeng, H.; Jiang, Y.; Beer-Hammer, S.; Yu, X.: Awake Mouse fMRI and Pupillary Recordings in the Ultra-High Magnetic Field. Frontiers in Neuroscience 16, 886709 (2022)

Grandjean, J.; Desrosiers-Gregoire, G.; Anckaerts, C.; Angeles-Valdez, D.; Ayad, F.; Barrière, D.; Blockx, I.; Bortel, A.; Broadwater, M.; Cardoso, B. et al.; Célestine, M.; Chavez-Negrete, J.; Choi, S.; Christiaen, E.; Clavijo, P.; Colon-Perez, L.; Cramer, S.; Daniele, T.; Dempsey, E.; Diao, Y.; Doelemeyer, A.; Dopfel, D.; Dvořáková, L.; Falfán-Melgoza, C.; Fernandes, F.; Fowler, C.; Fuentes-Ibañez, A.; Garin, C.; Gelderman, E.; Golden, C. E.; Guo, C. C.; Henckens, M. J.; Hennessy, L. A.; Herman, P.; Hofwijks, N.; Horien, C.; Ionescu, T. M.; Jones, J.; Kaesser, J.; Kim, E.; Lambers, H.; Lazari, A.; Lee, S.-H.; Lillywhite, A.; Liu, Y.; Liu, Y. Y.; López-Castro, A.; López-Gil, X.; Ma, Z.; MacNicol, E.; Madularu, D.; Mandino, F.; Marciano, S.; McAuslan, M. J.; McCunn, P.; McIntosh, A.; Meng, X.; Meyer-Baese, L.; Missault, S.; Moro, F.; Naessens, D.; Nava-Gomez, L. J.; Nonaka, H.; Ortiz, J. J.; Paasonen, J.; Peeters, L. M.; Pereira, M.; Perez, P. D.; Pompilus, M.; Prior, M.; Rakhmatullin, R.; Reimann, H. M.; Reinwald, J.; de Rio, R. T.; Rivera-Olvera, A.; Ruiz-Pérez, D.; Russo, G.; Rutten, T. J.; Ryoke, R.; Sack, M.; Salvan, P.; Sanganahalli, B. G.; Schroeter, A.; Seewoo, B. J.; Selingue, E.; Seuwen, A.; Shi, B.; Sirmpilatze, N.; Smith, J. A.; Smith, C.; Sobczak, F.; Stenroos, P. J.; Straathof, M.; Strobelt, S.; Sumiyoshi, A.; Takahashi, K.; Torres-Garcia, M.; Tudela, R.; van den Berg, M.; van der Marel, K.; van Hout, A. T.; Vertullo, R.; Vidal, B.; Vrooman, R. M.; Wang, V. X.; Wank, I.; Watson, D. J.; Yin, T.; Zhang, Y.; Zurbruegg, S.; Achard, S.; Alcauter, S.; Auer, D. P.; Barbier, E. L.; Baudewig, J.; Beckmann, C. F.; Beckmann, N.; Becq, G. J.; Blezer, E. L.; Bolbos, R.; Boretius, S.; Bouvard, S.; Budinger, E.; Buxbaum, J. D.; Cash, D.; Chapman, V.; Chuang, K.-H.; Ciobanu, L.; Coolen, B.; Dalley, J. W.; Dhenain, M.; Dijkhuizen, R. M.; Esteban, O.; Faber, C.; Febo, M.; Feindel, K. W.; Forloni, G.; Fouquet, J.; Garza-Villarreal, E. A.; Gass, N.; Glennon, J. C.; Gozzi, A.; Gröhn, O.; Harkin, A.; Heerschap, A.; Helluy, X.; Herfert, K.; Heuser, A.; Homberg, J. R.; Houwing, D. J.; Hyder, F.; Ielacqua, G. D.; Jelescu, I. O.; Johansen-Berg, H.; Kaneko, G.; Kawashima, R.; Keilholz, S. D.; Keliris, G. A.; Kelly, C.; Kerskens, C.; Khokhar, J. Y.; Kind, P. C.; Langlois, J.-B.; Lerch, J. P.; López-Hidalgo, M. A.; Manahan-Vaughan, D.; Marchand, F.; Mars, R. B.; Marsella, G.; Micotti, E.; Muñoz-Moreno, E.; Near, J.; Niendorf, T.; Otte, W. M.; Pais, P.; Pan, W.-J.; Prado-Alcalá, R. A.; Quirarte, G. L.; Rodger, J.; Rosenow, T.; Baptista, C. S.; Sartorius, A.; Sawiak, S. J.; Scheenen, T. W.; Shemesh, N.; Shih, Y.-Y. I.; Shmuel, A.; Soria, G.; Stoop, R.; Thompson, G. J.; Till, S. M.; Todd, N.; Van Der Linden, A.; van der Toorn, A.; van Tilborg, G. A.; Vanhove, C.; Veltien, A.; Verhoye, M.; Wachsmuth, L.; Weber-Fahr, W.; Wenk, P.; Yu, X.; Zerbi, V.; Zhang, N.; Zhang, B. B.; Zimmer, L.; Devenyi, G. A.; Chakravarty, M. M.; Hess, A.: StandardRat: A multi-center consensus protocol to enhance functional connectivity specificity in the rat brain. (submitted)

Chen, Y.; Wang, Q.; Choi, S.; Zeng, H.; Takahashi, K.; Qian, C.; Yu, X.: Focal fMRI signal enhancement with implantable inductively coupled detectors. NeuroImage 247, 118793, pp. 1 - 8 (2022)

Chen, X.; Jiang, Y.; Choi, S.; Pohmann, R.; Scheffler, K.; Kleinfeld, D.; Yu, X.: Assessment of single-vessel cerebral blood velocity by phase contrast fMRI. PLoS Biology 19 (9), e3000923, pp. 1 - 18 (2021)

Sobczak, F.; Pais-Roldán, P.; Takahashi, K.; Yu, X.: Decoding the brain state-dependent relationship between pupil dynamics and resting state fMRI signal fluctuation. eLife 10, e68980, pp. 1 - 21 (2021)

Sobczak, F.; He, Y.; Sejnowski, T.; Yu, X.: Predicting the fMRI Signal Fluctuation with Recurrent Neural Networks Trained on Vascular Network Dynamics. Cerebral Cortex 31 (2), pp. 826 - 844 (2021)

Chen, Y.; Sobczak, F.; Pais-Roldán, P.; Schwarz, C.; Koretsky, A.; Yu, X.: Mapping the Brain-Wide Network Effects by Optogenetic Activation of the Corpus Callosum. Cerebral Cortex 30 (11), pp. 5885 - 5898 (2020)

He, Y.; Wang, M.; Yu, X.: High spatiotemporal vessel-specific hemodynamic mapping with multi-echo single-vessel fMRI. Journal of Cerebral Blood Flow and Metabolism 40 (10), pp. 2098 - 2114 (2020)

Choi, S.; Takahashi, K.; Jiang, Y.; Köhler, S.; Zeng, H.; Wang, Q.; Ma, Y.; Yu, X.: Real-Time fMRI Brain Mapping in Animals. Journal of Visualized Experiments 2020 (163) (2020)

Drew, P.; Mateo, C.; Turner, K.; Yu, X.; Kleinfeld, D.: Ultra-slow Oscillations in fMRI and Resting-State Connectivity: Neuronal and Vascular Contributions and Technical Confounds. Neuron 107 (5), pp. 782 - 804 (2020)

Ovsepian, S.; Jiang, Y.; Sardella, T.; Malekzadeh-Najafabadi , J.; Burton, N.; Yu, X.; Ntziachristos , V.: Visualizing cortical response to optogenetic stimulation and sensory inputs using multispectral handheld optoacoustic imaging. Photoacoustics 17, 100153, pp. 1 - 4 (2020)

Pais-Roldán, P.; Takahashi, K.; Sobczak, F.; Chen, Y.; Zhao, X.; Zeng, H.; Jiang, Y.; Yu, X.: Indexing brain state-dependent pupil dynamics with simultaneous fMRI and optical fiber calcium recording. Proceedings of the National Academy of Sciences of the United States of America 117 (12), pp. 6875 - 6882 (2020)

Handwerker, J.; Pérez-Rodas, M.; Beyerlein, M.; Vincent, F.; Beck, A.; Freytag, N.; Yu, X.; Pohmann, R.; Anders, J.; Scheffler, K.: A CMOS NMR needle for probing brain physiology with high spatial and temporal resolution. Nature methods 17 (1), pp. 64 - 67 (2020)

Chen, X.-M.; Sobczak, F.; Chen, Y.; Qian, C.; Lu, Z.; Ayata, C.; Logothetis, N.; Yu, X.: Mapping Optogenetically Driven Single-Vessel fMRI with Concurrent Neuronal Calcium Recordings in the Rat Hippocampus. Nature Communications 10 (1), 5239, pp. 1 - 12 (2019)

Chen, Y.; Pais-Roldán, P.; Chen, X.; Frosz, M.; Yu, X.: MRI-guided robotic arm drives optogenetic fMRI with concurrent Ca2+ recording. Nature Communications 10 (1), 2536, pp. 1 - 11 (2019)

Pais-Roldán, P.; Edlow, B.; Jiang, Y.; Stelzer, J.; Zou, M.; Yu, X.: Multimodal assessment of recovery from coma in a rat model of diffuse brainstem tegmentum injury. NeuroImage 189, pp. 615 - 630 (2019)

He, Y.; Wang, M.; Pohmann, R.; Polimeni, J.; Scheffler, K.; Rosen, B.; Kleinfeld, D.; Yu, X.: Ultra-Slow Single-Vessel BOLD and CBV-Based fMRI Spatiotemporal Dynamics and Their Correlation with Neuronal Intracellular Calcium Signals. Neuron 97 (4), e5, pp. 925 - 939 (2018)

Wang, M.; He, Y.; Sejnowski, T.; Yu, X.: Brain-state dependent astrocytic Ca2+ signals are coupled to both positive and negative BOLD-fMRI signals. Proceedings of the National Academy of Sciences of the United States of America 115 (7), pp. E1647 - E1656 (2018)