Publications of A Zien

Sonnenburg, S.; Rätsch, G.; Henschel, S.; Widmer, C.; Behr, J.; Zien, A.; De Bona, F.; Binder, A.; Gehl, C.; Franc, V.: The SHOGUN Machine Learning Toolbox. Journal of Machine Learning Research 11, pp. 1799 - 1802 (2010)

Schweikert, G.; Behr, J.; Zien, A.; Zeller, G.; Ong, C.; Sonnenburg, S.; Rätsch, G.: mGene.web: a web service for accurate computational gene finding. Nucleic Acids Research (London) 37 (Supplement 2), pp. W312 - W316 (2009)

Zien, A.; Gebhard, P.; Fundel, K.; Aigner, T.: Phenotyping of Chondrocytes In Vivo and In Vitro Using cDNA Array Technology. Clinical Orthopaedics and Related Research 460, pp. 226 - 233 (2007)

Aigner, T.; Fundel, K.; Saas, J.; Gebhard, P.; Haag, J.; Weiss , T.; Zien, A.; Obermayr, F.; Zimmer, R.; Bartnik, E.: Large-Scale Gene Expression Profiling Reveals Major Pathogenetic Pathways of Cartilage Degeneration in Osteoarthritis. Arthritis and Rheumatism 54 (11), pp. 3533 - 3544 (2006)

Aigner, T.; McKenna, L.; Zien, A.; Fan , Z.; Gebhard, P.; Zimmer, R.: Gene expression profiling of serum- and interleukin-1β-stimulated primary human adult articular chondrocytes: A molecular analysis based on chondrocytes isolated from one donor. Cytokine 31 (3), pp. 227 - 240 (2005)

Schorle, C.; Finger, F.; Zien, A.; Block , J.; Gebhard, P.; Aigner, T.: Phenotypic characterization of chondrosarcoma-derived cell lines. Cancer Letters 226 (2), pp. 143 - 154 (2005)

Finger, F.; Schorle, C.; Söder, S.; Zien, A.; Goldring, M.; Aigner, T.: Phenotypic Characterization of Human Chondrocyte Cell Line C-20/A4: A Comparison between Monolayer and Alginate Suspension Culture. Cells Tissues Organs 178 (2), pp. 65 - 77 (2004)

Aigner, T.; Finger, F.; Zien, A.; Bartnik, E.: cDNA-Microarrays in der Knorpelforschung: Funktionale Genomik der Osteoarthrose. Zeitschrift für Orthopädie und ihre Grenzgebiete 142 (2), pp. 241 - 247 (2004)

Aigner, T.; Finger F, Zien, A.; Bartnik, E.: cDNA-Microarray Technology in Cartilage Research - Functional Genomics of Osteoarthritis [in German]. Zeitschrift für Orthopädie und ihre Grenzgebiete 142 (2), pp. 241 - 247 (2004)

Finger, F.; Schorle, C.; Zien, A.; Gebhard, P.; Goldring, M.; Aigner, T.: Molecular phenotyping of human chondrocyte cell lines T/C-28a2, T/C-28a4, and C-28/I2. Arthritis & Rheumatology 48 (12), pp. 3395 - 3403 (2003)

Becker, A.; Chen, J.; Zien, A.; Sochivko, D.; Normann , S.; Schramm, J.; Elger, C.; Wiesler, O.; Blumcke, I.: Correlated stage- and subfield-associated hippocampal gene expression patterns in experimental and human temporal lobe epilepsy. European Journal of Neuroscience: European Neuroscience Association 18 (10), pp. 2792 - 2802 (2003)

Knorr, T.; Obermayr, F.; Bartnik, E.; Zien, A.; Aigner, T.: YKL-39 (chitinase 3-like protein 2), but not YKL-40 (chitinase 3-like protein 1), is up regulated in osteoarthritic chondrocytes. Annals of the Rheumatic Diseases 62 (10), pp. 995 - 998 (2003)

Zien, A.; Fluck, J.; Zimmer, R.; Lengauer, T.: Microarrays: How Many Do You Need? Journal of Computational Biology 10 (3-4), pp. 653 - 667 (2003)

Aigner, T.; Bartnik, E.; Zien, A.; Zimmer, R.: Functional Genomics of Osteoarthritis. Pharmacogenomics 3 (5), pp. 635 - 650 (2002)

Sommer, I.; Zien, A.; von Ohsen , N.; Zimmer, R.; Lengauer, T.: Confidence measures for protein fold recognition. Bioinformatics 18 (6), pp. 802 - 812 (2002)

Aigner, T.; Zien, A.; Gehrsitz, A.; Gebhard, P.; McKenna, L.: Anabolic and Catabolic Gene Expression Pattern Analysis in Normal Versus Osteoarthritic Cartilage Using Complementary DNA-Array Technology. Arthritis and Rheumatism 44 (12), pp. 2777 - 2789 (2001)

Chapelle, O.; Schölkopf, B.; Zien, A.: Semi-Supervised Learning. MIT Press, Cambridge, MA, USA (2006), 508 pp.

Chapelle, O.; Schölkopf, B.; Zien, A.: Analysis of Benchmarks. In: Semi-Supervised Learning, 21, pp. 377 - 393 (Eds. Chapelle, O.; Schölkopf, B.; Zien, A.). MIT Press, Cambridge, MA, USA (2006)

Chapelle, O.; Schölkopf, B.; Zien, A.: A Discussion of Semi-Supervised Learning and Transduction. In: Semi-Supervised Learning, 25, pp. 473 - 478 (Eds. Chapelle, O.; Schölkopf, B.; Zien, A.). MIT Press, Cambridge, MA, USA (2006)

Aigner, T.; Saas, J.; Zien, A.; Zimmer, R.; Gebhard, P.; Knorr, T.: Analysis of differential gene expression in healthy and osteoarthritic cartilage and isolated chondrocytes by microarray analysis. In: Cartilage and Osteoarthritis Volume 1: Cellular and Molecular Tools, pp. 109 - 128 (Eds. Sabatini, M.; Pastoureau, P.; De Ceuninck, F.). Humana Press, Totowa, NJ, USA (2004)