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Marcel Oberlaender

Address: Spemannstr. 38
E-Mail: marcel.oberlaender

 

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Marcel Oberlaender

Position: Research Group Leader  Unit: 

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Articles (20):

Kornfeld J, Benezra SE, Narayanan RT, Svara F, Egger R, Oberlaender M, Denk W and Long MA (April-2017) EM connectomics reveals axonal target variation in a sequence-generating network eLIFE 6(3) 1-20.
Landau ID, Egger R, Dercksen VJ, Oberlaender M and Sompolinsky H (December-2016) The Impact of Structural Heterogeneity on Excitation-Inhibition Balance in Cortical Networks Neuron 92(5) 1106–1121.
Barth A, Burkhalter A, Callaway EM, Connors BW, Cauli B, DeFelipe J, Feldmeyer D, Freund T, Kawaguchi Y, Kisvarday Z, Kubota Y, McBain C, Oberlaender M, Rossier J, Rudy B, Staiger JF, Somogyi P, Tamas G and Yuste R (September-2016) Comment on “Principles of connectivity among morphologically defined cell types in adult neocortex” Science 353(6304) 1108.
Narayanan RT, Egger R, Johnson AS, Mansvelder HD, Sakmann B, de Kock CP and Oberlaender M (November-2015) Beyond Columnar Organization: Cell Type- and Target Layer-Specific Principles of Horizontal Axon Projection Patterns in Rat Vibrissal Cortex Cerebral Cortex 25(11) 4450-4468.
Egger R, Schmitt AC, Wallace DJ, Sakmann B, Oberlaender M and Kerr JND (November-2015) Robustness of sensory-evoked excitation is increased by inhibitory inputs to distal apical tuft dendrites Proceedings of the National Academy of Sciences of the United States of America 112(45) 14072–14077.
Haberl MG, Viana da Silva S, Guest JM, Ginger M, Ghanem A, Mulle C, Oberlaender M, Conzelmann K-K and Frick A (May-2015) An anterograde rabies virus vector for high-resolution large-scale reconstruction of 3D neuron morphology Brain Structure and Function 220(3) 1369-1379.
Egger R, Dercksen VJ, Udvary D, Hege H-C and Oberlaender M (November-2014) Generation of dense statistical connectomes from sparse morphological data Frontiers in Neuroanatomy 8(129) 1-18.
Dercksen VJ, Hege M and Oberlaender M (April-2014) The Filament Editor: An Interactive Software Environment for Visualization, Proof-Editing and Analysis of 3D Neuron Morphology Neuroinformatics 12(2) 325-339.
Meyer HS, Egger R, Guest JM, Foerster R, Reissl S and Oberlaender M (November-2013) Cellular organization of cortical barrel columns is whisker-specific Proceedings of the National Academy of Sciences of the United States of America 110(47) 19113–19118.
Egger R, Narayanan RT, Helmstaedter M, de Kock CPJ and Oberlaender M (December-2012) 3D Reconstruction and Standardization of the Rat Vibrissal Cortex for Precise Registration of Single Neuron Morphology PLoS Computational Biology 8(12) 1-18.
Oberlaender M, de Kock CPJ, Bruno RM, Ramirez A, Meyer HS, Dercksen VJ, Helmstaedter M and Sakmann B (October-2012) Cell Type-Specific Three-Dimensional Structure of Thalamocortical Circuits in a Column of Rat Vibrissal Cortex Cerebral Cortex 22(10) 2375-2391.
Oberlaender M, Ramirez A and Bruno RM (May-2012) Sensory experience restructures thalamocortical axons during adulthood Neuron 74(4) 648–655.
Kleinfeld D, Bharioke A, Blinder P, Bock DD, Briggman KL, Chklovskii DB, Denk W, Helmstaedter M, Kaufhold JP, Lee W-CA, Meyer HS, Micheva KD, Oberlaender M, Prohaska S, Reid RC, Smith SJ, Takemura S, Tsai PS and Sakmann B (November-2011) Large-Scale Automated Histology in the Pursuit of Connectomes Journal of Neuroscience 31(45) 16125-16138.
Lang S, Dercksen VJ, Sakmann B and Oberlaender M (November-2011) Simulation of signal flow in 3D reconstructions of an anatomically realistic neural network in rat vibrissal cortex Neural Networks 24(9) 998–1011.
Boudewijns ZSRM, Kleele T, Mansvelder HD, Sakmann B, de Kock CPJ and Oberlaender M (July-2011) Semi-automated three-dimensional reconstructions of individual neurons reveal cell type-specific circuits in cortex Communative & Integrative Biology 4(4) 486-488.
Oberlaender M, Boudewijns ZSRM, Kleele T, Mansvelder HD, Sakmann B and de Kock CPJ (March-2011) Three-dimensional axon morphologies of individual layer 5 neurons indicate cell type-specific intracortical pathways for whisker motion and touch Proceedings of the National Academy of Sciences of the United States of America 108(10) 4188-4193.
Meyer HS, Wimmer VC, Oberlaender M, de Kock CPJ, Sakmann B and Helmstaedter M (October-2010) Number and Laminar Distribution of Neurons in a Thalamocortical Projection Column of Rat Vibrissal Cortex Cerebral Cortex 20(10) 2277-2286.
Oberlaender M, Dercksen VJ, Egger R, Gensel M, Sakmann B and Hege H-C (May-2009) Automated three-dimensional detection and counting of neuron somata Journal of Neuroscience Methods 180(1) 147–160.
Oberlaender M, Broser PJ, Sakmann B and Hippler S (February-2009) Shack-Hartmann wave front measurements in cortical tissue for deconvolution of large three-dimensional mosaic transmitted light brightfield micrographs Journal of Microscopy 233(2) 275–289.
Oberlaender M, Bruno RM, Sakmann B and Broser PJ (December-2007) Transmitted light brightfield mosaic microscopy for three-dimensional tracing of single neuron morphology Journal of Biomedical Optics 12(6) 1-19.

Conference papers (3):

Dercksen VJ, Hege H-C and Oeberlaender M (November-14-2014) The Filament Editor: An Interactive Software Environment for Visualization, Proof-Editing, and Analysis of 3D Neuron Morphology, Short Course II (Neuroscience 2014): Advances in Brain-Scale, Automated Anatomical Techniques: Neuronal Reconstruction, Tract Tracing, and Atlasing, Society for Neuroscience, Washington, DC, USA, 64-72.
Dercksen VJ, Egger R, Hege H-C and Oberlaender M (September-2012) Synaptic Connectivity in Anatomically Realistic Neural Networks: Modeling and Visual Analysis, Third Eurographics Workshop on Visual Computing for Biology and Medicine (VCBM 2012), Eurographics Association, Goslar, Germany, 17-24.
Dercksen VJ, Weber B, Gunther D, Oberlaender M, Prohaska S and Hege H-C (July-2009) Automatic alignment of stacks of filament data, IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI '09), IEEE, Piscataway, NJ, USA, 971-974.

Contributions to books (4):

Narayanan RT, Egger R, de Kock CPJ and Oberlaender M: Neuronal Cell Types in the Neocortex, 183–202. In: Axons and Brain Architecture, (Ed) K.S. Rockland, Elsevier Academic Press, Amsterdam, The Netherlands, (2016).
Egger R and Oberlaender M: Cell Types in the Cerebral Cortex: An Overview from the Rat Vibrissal Cortex, 59-64. In: Brain Mapping: An Encyclopedic Reference, (Ed) A. W. Toga, Academic Press, Amsterdam, The Netherlands, (2015).
Egger R, Dercksen VJ, de Kock CPJ and Oberlaender M: Reverse Engineering the 3D Structure and Sensory-Evoked Signal Flow of Rat Vibrissal Cortex, 127-145. In: The Computing Dendrite: From Structure to Function, (Ed) H. Cuntz, Springer, New York, NY, USA, (2014).
Dercksen VJ, Oberlaender M, Sakmann B and Hege H-C: Interactive Visualization: A Key Prerequisite for Reconstruction and Analysis of Anatomically Realistic Neural Networks, 27-44. In: Visualization in Medicine and Life Sciences II: Progress and New Challenges, (Ed) L. Linsen, Springer, Berlin, Germany, (2012).

Technical reports (1):

Egger R, Dercksen VJ, Udvary D, Hege H-C and Oberlaender M: Generation of dense statistical connectomes from sparse morphological data, ZIB Report 14-43, Konrad-Zuse-Zentrum für Informationstechnik Berlin, (November-2014).

Posters (38):

Kornfeld J, Benezra S, Narayanan RT, Svara F, Oberlaender M, Denk W and Long MA (November-15-2016): The anatomical substrate of precise timing in zebra finch HVC, 46th Annual Meeting of the Society for Neuroscience (Neuroscience 2016), San Diego, CA, USA.
Udvary D, Egger R, Dercksen VJ and Oberlaender M (November-13-2016): Dense statistical connectome of rat barrel cortex, 46th Annual Meeting of the Society for Neuroscience (Neuroscience 2016), San Diego, CA, USA.
Oberlaender M, Egger R, Rojas-Piloni G, Narayanan RT, Guest JM, de Kock CPJ and Udvary D (November-12-2016): Relationships between sensory-evoked synaptic input and long-range target-related spiking output of cortical layer 5, 46th Annual Meeting of the Society for Neuroscience (Neuroscience 2016), San Diego, CA, USA.
Udvary D, Meyer H-S, Egger R, Guest JM, Feldmeyer D and Oberlaender M (November-24-2015): Inhibitory Transfer of Thalamocortical Input in a Column of Rat Vibrissal Cortex, 16th Conference of Junior Neuroscientists of Tübingen (NeNa 2015), Schramberg, Germany.
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Czubayko U, Bassetto G, Narayanan RT, Oberlaender M, Macke JH and Kerr JND (October-18-2015): Anatomical basis of spiking correlation in upper layers of somatosensory cortex, 45th Annual Meeting of the Society for Neuroscience (Neuroscience 2015), Chicago, IL, USA.
Benezra S, Kornfeld J, Narayanan RT, Oberlaender M, Denk W and Long M (October-18-2015): Connectomic analysis of local HVC circuitry in the zebra finch, 45th Annual Meeting of the Society for Neuroscience (Neuroscience 2015), Chicago, IL, USA.
Egger R, de Kock CPJ, Narayanan RT and Oberlaender M (September-16-2015): The origin of broad whisker touch receptive fields in a major output cell type of cortex, Bernstein Conference 2015, Heidelberg, Germany.
Laakso R, Egger R, Oberlaender M and Krieger P (June-9-2015): Spatial point pattern analysis of neuron somata in the rodent somatosensory barrel cortex, 1st International Conference on Mathematical NeuroScience (ICMNS 2015), Antibes Juan-les-Pins, France.
Benezra S, Narayanan RT, Oberlaender M and Long MA (November-18-2014): In vivo two-photon targeted single-cell labeling in the zebra finch, 44th Annual Meeting of the Society for Neuroscience (Neuroscience 2014), Washington, DC, USA.
Egger R, Dercksen VJ, Udvary D, Hege H-C and Oberlaender M (November-18-2014): The barrel cortex connectome: dense connectivity from sparse reconstructions of neural circuits, 44th Annual Meeting of the Society for Neuroscience (Neuroscience 2014), Washington, DC, USA.
Landau ID, Egger R, Oberlaender M and Sompolinsky H (November-18-2014): The relationship between microcircuit structure and dynamics in the rat barrel cortex, 44th Annual Meeting of the Society for Neuroscience (Neuroscience 2014), Washington, DC, USA.
Udvary D, Egger R, Guest J, Helmstaedter M, Sakmann B, Feldmeyer D and Oberlaender M (November-17-2014): Axonal IN types in rat's barrel cortex, 44th Annual Meeting of the Society for Neuroscience (Neuroscience 2014), Washington, DC, USA.
Narayanan RT, Egger R, Mohan H, Johnson A, Sakmann B, de Kock C and Oberlaender M (November-17-2014): Beyond columnar organization: Horizontal pathways dominate cortical circuitry, 44th Annual Meeting of the Society for Neuroscience (Neuroscience 2014), Washington, DC, USA.
Johnson A, Zhovnir O, Egger R, Sakmann B and Oberlaender M (November-17-2014): Buildingbrains-3d: A tool to integrate neuron morphologies into 3d brain reconstructions, 44th Annual Meeting of the Society for Neuroscience (Neuroscience 2014), Washington, DC, USA.
Rojas-Piloni G, Guest M, Johnson A, Egger R, Narayanan R, Udvary D, Sakmann B and Oberlaender M (November-17-2014): Cell type-specific subcortical targets of layer 5 projecting neurons in the rat vibrissal cortex, 44th Annual Meeting of the Society for Neuroscience (Neuroscience 2014), Washington, DC, USA.
Oberlaender M, Egger R, Narayanan RT, Udvary D, Guest JM, Johnson A and Rojas-Piloni G (November-17-2014): Reverse engineering sensory perception and decision making: Bridging physiology, anatomy and behavior, 44th Annual Meeting of the Society for Neuroscience (Neuroscience 2014), Washington, DC, USA.
Guest JM, Egger R, Rojas-Piloni G, Strick P, Sakmann B and Oberlaender M (November-17-2014): Structural basis of sensory-motor control, 44th Annual Meeting of the Society for Neuroscience (Neuroscience 2014), Washington, DC, USA.
Udvary D, Egger R, Guest J, Helmstaedter M, Sakmann B, Feldmeyer D and Oberlaender M (November-13-2014): Axonal IN types in rat's barrel cortex, 27th Annual Barrels Meeting (Barrels XXVII), Baltimore, MD, USA.
Egger R, Dercksen VJ, Udvary D, Hege H-C and Oberlaender M (September-8-2014): The barrel cortex connectome: dense statistical connectivity from sparse reconstructions of neural circuits, Max Planck / HHMI Connectomics Conference, Berlin, Germany.
Egger R, Schmitt AC, Dercksen VJ, Narayanan RT, de Kock CPJ, Kerr J and Oberlaender M (June-2014): Reverse Engineering the 3D Structure and In Vivo Function of Rat Vibrissal Cortex, 6th International Conference on Brain and Cognitive Engineering (BCE 2014), Tübingen, Germany.
Oberlaender M, Egger R, Narayanan RT, Dercksen VJ, de Kock CPJ and Sakmann B (November-13-2013): The barrel cortex "Connectome" and its functional implications for sensory, 43rd Annual Meeting of the Society for Neuroscience (Neuroscience 2013), San Diego, CA, USA.
Egger R, Schmitt AC, Dercksen VJ, de Kock CPJ, Kerr J and Oberlaender M (November-9-2013): Reverse-engineering sensory-evoked signal flow in rat barrel cortex, 43rd Annual Meeting of the Society for Neuroscience (Neuroscience 2013), San Diego, CA, USA.
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Last updated: Monday, 22.05.2017