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Dr. Jakob Macke

Address: Spemannstrasse 41
72074 Tübingen
Room number: 2.B.09
Phone: +49 7071 601 1721
E-Mail: jakob.macke

 

Picture of Macke, Jakob, Dr.

Jakob Macke

Position: Research Group Leader  Unit: Macke

Since 05/2012: Junior research group leader, MPI for Biological Cybernetics and Bernstein Center for Computational Neuroscience

04/2010-04/2012: Postdoc at the Gatsby Computational Neuroscience Unit, University College London, UK

10/2005-04/2010: PhD student, MPI for Biological Cybernetics

06/2005: Master in Mathematics, University of Oxford, UK

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Articles (17):

Fründ I , Wichmann FA Person and Macke J Person (June-2014) Quantifying the effect of intertrial dependence on perceptual decisions Journal of Vision 14(7:9) 1-16.
Watanabe M Person, Bartels A Person, Macke JH Person, Murayama Y Person and Logothetis NK Person (November-2013) Temporal Jitter of the BOLD Signal Reveals a Reliable Initial Dip and Improved Spatial Resolution Current Biology 23(21) 2146–2150.
Macke JH Person, Murray I Person and Latham PE (August-2013) Estimation bias in maximum entropy models Entropy 15(8) 3109-3219.
Haefner RM Person, Gerwinn S Person, Macke JH Person and Bethge M Person (February-2013) Inferring decoding strategies from choice probabilities in the presence of correlated variability Nature Neuroscience 16(2) 235–242.
Schwartz G , Macke J Person, Amodei D , Tang H and Berry MJ (August-2012) Low Error Discrimination using a Correlated Population Code Journal of Neurophysiology 108(4) 1069-1088.
Buesing L , Macke JH Person and Sahani M (March-2012) Learning stable, regularised latent models of neural population dynamics Network 23(1-2) 24-47.
Macke J Person, Berens P Person and Bethge M Person (July-2011) Statistical analysis of multi-cell recordings: linking population coding models to experimental data Frontiers in Computational Neuroscience 5(35) 1-2.
Macke JH Person, Opper M and Bethge M Person (May-2011) Common Input Explains Higher-Order Correlations and Entropy in a Simple Model of Neural Population Activity Physical Review Letters 106(20) 1-4.
Macke JH Person, Gerwinn S Person, White LW , Kaschube M and Bethge M Person (May-2011) Gaussian process methods for estimating cortical maps NeuroImage 56(2) 570-581.
Gerwinn S Person, Macke JH Person and Bethge M Person (February-2011) Reconstructing stimuli from the spike-times of leaky integrate and fire neurons Frontiers in Neuroscience 5(1) 1-16.
Lyamzin DR , Macke JH Person and Lesica NA (October-2010) Modeling population spike trains with specified time-varying spike rates, trial-to-trial variability, and pairwise signal and noise correlations Frontiers in Computational Neuroscience 4(144) 1-11.
Macke JH Person and Wichmann FA Person (May-2010) Estimating predictive stimulus features from psychophysical data: The decision image technique applied to human faces Journal of Vision 10(5:22) 1-24.
Gerwinn S Person, Macke J Person and Bethge M Person (April-2010) Bayesian inference for generalized linear models for spiking neurons Frontiers in Computational Neuroscience 4(12) 1-42.
Gerwinn S Person, Macke JH Person and Bethge M Person (October-2009) Bayesian population decoding of spiking neurons Frontiers in Computational Neuroscience 3(21) 1-28.
Macke JH Person, Berens P Person, Ecker AS Person, Tolias AS Person and Bethge M Person (February-2009) Generating Spike Trains with Specified Correlation Coefficients Neural Computation 21(2) 397-423.
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Ku S-P Person, Gretton A Person, Macke J Person and Logothetis NK Person (September-2008) Comparison of Pattern Recognition Methods in Classifying High-resolution BOLD Signals Obtained at High Magnetic Field in Monkeys Magnetic Resonance Imaging 26(7) 1007-1014.
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Macke JH Person, Maack N , Gupta R , Denk W , Schölkopf B Person and Borst A (January-2008) Contour-propagation Algorithms for Semi-automated Reconstruction of Neural Processes Journal of Neuroscience Methods 167(2) 349-357.
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Conference papers (9):

Turaga SC , Buesing L , Packer AM , Dalgleish H , Pettit N , Hausser M and Macke JH Person (December-2013) Inferring neural population dynamics from multiple partial recordings of the same neural circuit In: Advances in Neural Information Processing Systems 26, Twenty-Seventh Annual Conference on Neural Information Processing Systems (NIPS 2013), Curran, Red Hook, NY, USA, 539-547.
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Buesing L , Macke JH Person and Sahani M (April-2013) Spectral learning of linear dynamics from generalised-linear observations with application to neural population data In: Advances in Neural Information Processing Systems 25, Twenty-Sixth Annual Conference on Neural Information Processing Systems (NIPS 2012), Curran, Red Hook, NY, USA, 1691-1699.
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Macke JH Person, Büsing L , Cunningham JP , Yu BM , Shenoy KV and Sahani M (January-2012) Empirical models of spiking in neural populations In: Advances in Neural Information Processing Systems 24, Twenty-Fifth Annual Conference on Neural Information Processing Systems (NIPS 2011), Curran, Red Hook, NY, USA, 1350-1358.
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Macke JH Person, Murray I and Latham P (January-2012) How biased are maximum entropy models? In: Advances in Neural Information Processing Systems 24, Twenty-Fifth Annual Conference on Neural Information Processing Systems (NIPS 2011), Curran, Red Hook, NY, USA, 2034-2042.
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Macke JH Person, Gerwinn S Person, Kaschube M , White LE and Bethge M Person (April-2010) Bayesian estimation of orientation preference maps In: Advances in Neural Information Processing Systems 22, 23rd Annual Conference on Neural Information Processing Systems (NIPS 2009), Curran, Red Hook, NY, USA, 1195-1203.
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Gerwinn S Person, Macke J Person, Seeger M Person and Bethge M Person (September-2008) Bayesian Inference for Spiking Neuron Models with a Sparsity Prior In: Advances in neural information processing systems 20, Twenty-First Annual Conference on Neural Information Processing Systems (NIPS 2007), Curran, Red Hook, NY, USA, 529-536.
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Macke JH Person, Zeck G Person and Bethge M Person (September-2008) Receptive Fields without Spike-Triggering In: Advances in neural information processing systems 20, Twenty-First Annual Conference on Neural Information Processing Systems (NIPS 2007), Curran, Red Hook, NY, USA, 969-976.
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Laub J , Macke JH Person, Müller K-R Person and Wichmann FA Person (September-2007) Inducing Metric Violations in Human Similarity Judgements In: Advances in Neural Information Processing Systems 19, Twentieth Annual Conference on Neural Information Processing Systems (NIPS 2006), MIT Press, Cambridge, MA, USA, 777-784.
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Bethge M Person, Gerwinn S Person and Macke JH Person (February-2007) Unsupervised learning of a steerable basis for invariant image representations In: Human Vision and Electronic Imaging XII, SPIE Human Vision and Electronic Imaging Conference 2007, SPIE, Bellingham, WA, USA, 1-12.
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Technical reports (1):

Macke JH Person, Opper M and Bethge M Person: The effect of pairwise neural correlations on global population statistics, 183, Max Planck Institute for Biological Cybernetics, Tübingen, Germany, (March-2009).
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Posters (25):

Archer E Person, Pillow JW and Macke J Person (March-2014): Low-dimensional models of neural population recordings with complex stimulus selectivity, Computational and Systems Neuroscience Meeting (COSYNE 2014), Salt Lake City, UT, USA.
Turaga SC , Buesing L , Packer A , Dalgleish H , Pettit N , Hauser M and Macke J Person (March-2014): Predicting noise correlations for non-simultaneously measured neuron pairs, Computational and Systems Neuroscience Meeting (COSYNE 2014), Salt Lake City, UT, USA.
Turaga SC , Buesing L , Packer M , Hausser M and Macke JH Person (November-13-2013): Inferring interactions between cell types from multiple calcium imaging snapshots of the same neural circuit, 43rd Annual Meeting of the Society for Neuroscience (Neuroscience 2013), San Diego, CA, USA.
Macke J Person, Murray I Person and Latham P (March-2013): How biased are maximum entropy models of neural population activity?, Computational and Systems Neuroscience Meeting (COSYNE 2013), Salt Lake City, UT, USA.
Buesing L , Macke J Person and Sahani M (March-2013): Robust estimation for neural state-space models, Computational and Systems Neuroscience Meeting (COSYNE 2013), Salt Lake City, UT, USA.
Macke JH Person, Büsing L , Cunningham JP , Yu BM , Shenoy KV and Sahani M (May-2012): Empirical models of spiking in neural populations, Janelia Farm Conference 2012: Machine Learning, Statistical Inference, and Neuroscience, Ashburn, VA, USA.
Haefner RM Person, Gerwinn S Person, Macke JH Person and Bethge M Person (November-2011): Relationship between decoding strategy, choice probabilities and neural correlations in perceptual decision-making task, 41st Annual Meeting of the Society for Neuroscience (Neuroscience 2011), Washington, DC, USA.
Macke JH Person, Büsing L , Cunningham JP , Yu BM , Shenoy KV and Sahani M (February-2011): Modelling low-dimensional dynamics in recorded spiking populations, Computational and Systems Neuroscience Meeting (COSYNE 2011), Salt Lake City, UT, USA.
Macke JH Person, Opper M and Bethge M Person (February-2011): The e ffect of common input on higher-order correlations and entropy in neural populations, Computational and Systems Neuroscience Meeting (COSYNE 2011), Salt Lake City, UT, USA.
Macke JH Person, Sebastian G , White LE , Kaschube M and Bethge M Person (November-2010): Estimating cortical maps with Gaussian process models, 40th Annual Meeting of the Society for Neuroscience (Neuroscience 2010), San Diego, CA, USA.
Macke JH Person and Wichmann FA Person (August-2009): Estimating Critical Stimulus Features from Psychophysical Data: The Decision-Image Technique Applied to Human Faces, 9th Annual Meeting of the Vision Sciences Society (VSS 2009), Naples, FL, USA, Journal of Vision, 9(8) 31.
Macke J Person, Gerwinn S Person, White L , Kaschube M and Bethge M Person (March-2009): Bayesian estimation of orientation preference maps, Computational and Systems Neuroscience Meeting (COSYNE 2009), Salt Lake City, UT, USA, Frontiers in Systems Neuroscience, 2009(Conference Abstracts: Computational and Systems Neuroscience).
Gerwinn S Person, Macke J Person and Bethge M Person (March-2009): Bayesian Population Decoding of Spiking Neurons, Computational and Systems Neuroscience Meeting (COSYNE 2009), Salt Lake City, UT, USA,, Frontiers in Systems Neuroscience, 2009(Conference Abstracts: Computational and Systems Neuroscience).
Berens P Person, Macke JH Person, Ecker AS Person, Cotton RJ , Bethge M Person and Tolias AS Person (March-2009): Sensory input statistics and network mechanisms in primate primary visual cortex, Computational and Systems Neuroscience Meeting (COSYNE 2009), Salt Lake City, UT, USA, Frontiers in Systems Neuroscience, 2009(Conference Abstracts: Computational and Systems Neuroscience).
Macke JH Person, Berens P Person, Ecker AS Person, Opper M , Tolias AS Person and Bethge M Person (July-2008): Modeling populations of spiking neurons with the Dichotomized Gaussian distribution, Annual Meeting 2008 of Sloan-Swartz Centers for Theoretical Neurobiology, Princeton, NJ, USA.
Ku S-P Person, Gretton A Person, Macke J Person, Tolias AT Person and Logothetis NK Person (June-2008): Analysis of Pattern Recognition Methods in Classifying Bold Signals in Monkeys at 7-Tesla, AREADNE 2008: Research in Encoding and Decoding of Neural Ensembles, Santorini, Greece.
Bethge M Person, Macke JH Person, Berens P Person, Ecker AS Person and Tolias AS Person (June-2008): Flexible Models for Population Spike Trains, AREADNE 2008: Research in Encoding and Decoding of Neural Ensembles, Santorini, Greece.
Berens P Person, Ecker AS Person, Subramaniyan M , Macke JH Person, Hauck P , Bethge M Person and Tolias AS Person (June-2008): Pairwise Correlations and Multineuronal Firing Patterns in the Primary Visual Cortex of the Awake, Behaving Macaque, AREADNE 2008: Research in Encoding and Decoding of Neural Ensembles, Santorini, Greece.
Macke JH Person, Schwartz G and Berry M (June-2008): The role of stimulus correlations for population decoding in the retina, AREADNE 2008: Research in Encoding and Decoding of Neural Ensembles, Santorini, Greece.
Schwartz G , Macke J Person and Berry M (March-2008): The role of stimulus correlations for population decoding in the retina, Computational and Systems Neuroscience Meeting (COSYNE 2008), Salt Lake City, UT, USA,.
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Maack N , Kapfer C , Macke JH Person, Schölkopf B Person, Denk W and Borst A (April-2007): 3D Reconstruction of Neural Circuits from Serial EM Images, 7th Meeting of the German Neuroscience Society, 31st Göttingen Neurobiology Conference, Göttingen, Germany, Neuroforum, 13(Supplement) 1195.
Bethge M Person, Macke JH Person, Gerwinn S Person and Zeck G Person (April-2007): Identifying temporal population codes in the retina using canonical correlation analysis, 7th Meeting of the German Neuroscience Society, 31st Göttingen Neurobiology Conference, Göttingen, Germany, Neuroforum, 13(Supplement) 359.
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Franz MO Person, Macke JH Person, Saleem A and Schultz SR (April-2007): Implicit Wiener Series for Estimating Nonlinear Receptive Fields, 7th Meeting of the German Neuroscience Society, 31st Göttingen Neurobiology Conference, Göttingen, Germany, Neuroforum, 13(Supplement) 1199.
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Last updated: Friday, 17.01.2014